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DTSTART;TZID=Europe/Paris:20260423T130000
DTEND;TZID=Europe/Paris:20260423T140000
DTSTAMP:20260404T162321
CREATED:20260327T093519Z
LAST-MODIFIED:20260327T093524Z
UID:10000114-1776949200-1776952800@sfp-alpes.fr
SUMMARY:Anamaria NESCULEA (LBBE - Lyon)
DESCRIPTION:TITRE A VENIR\nContact : lucie.lamothe@univ-grenoble-alpes.fr
URL:https://sfp-alpes.fr/event/anamaria-nesculea-lbbe-lyon/
LOCATION:IMAG – Salle de Réunion\, 150 place du Torrent\, St Martin d’Hères\, 38400\, France
CATEGORIES:Séminaire
ORGANIZER;CN="TIMC - IMAG":MAILTO:lucie.lamothe@univ-grenoble-alpes.fr
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BEGIN:VEVENT
DTSTART;TZID=Europe/Paris:20260423T140000
DTEND;TZID=Europe/Paris:20260423T160000
DTSTAMP:20260404T162321
CREATED:20260402T155914Z
LAST-MODIFIED:20260402T155920Z
UID:10000119-1776952800-1776960000@sfp-alpes.fr
SUMMARY:Soutenance de Thèse de Moritz KIRCHNER (IRIG / IBS)
DESCRIPTION:Molecular bases of a multiprotein assembly linking membrane biology to stress adaptation in enterobacteria\nRésumé : \n\nEnteric bacteria encounter a variety of stress factors when infecting their host. This includes but is not limited to acid stress\, oxygen limitation and antibiotic stress. Bacteria counteract such stressors using various stress response systems. A central factor in the stress adaptation of enterobacteria is their cell envelope\, in particular their cell membrane. A system of proteins which has been demonstrated to be involved in multiple stress adaptation pathways is the RavA-ViaA-LdcI triad in Escherichia coli. RavA and ViaA are two proteins with as of yet unknown function that have been shown to sensitise E. coli to aminoglycoside antibiotics under anaerobic conditions. RavA forms a large complex with LdcI\, an inducible lysine decarboxylase which is one of the central enzymes involved in acid stress response of E. coli. Both RavA and ViaA have been shown to bind specific anionic lipids and their lipid binding capacity is strongly linked to their sensitising effect to aminoglycosides.\n​This thesis presents the exploration of the connections these three proteins have to each other and their other binding partners by optical and electron microscopy in order to elucidate how their action leads to antibiotic sensitisation and what role their connection to the cell membrane and acid stress might play in this regard. It is shown that LdcI prefers to localise to the cell periphery to efficiently counteract acid stress and that mutations of its active site lead to large domain movements which might play a crucial role in its enzymatic activity. Furthermore\, an investigation of liposome decoration by RavA and ViaA is presented\, demonstrating the effect they have on membrane shape. In addition\, the first cryo-EM structure of ViaA is presented using helical repeat proteins to stabilise the protein. Finally\, predictions of RavA and ViaA protein-protein interactions in the inner E. coli membrane reveal possible functional targets of the proteins and the implications of these new possible avenues for action are discussed with regard of the microscopy investigations.\n\n—\n​​\n\n\nLes séminaires et soutenances sont ouverts à tous\, notez toutefois que l’accès au campus EPN nécessite un avis de rendez-vous. Merci de remplir ce formulaire  et de l’adresser\, plus de 48h à l’avance\, à ce contact. Pensez à vous munir d’une pièce d’identité le jour de votre visite.
URL:https://sfp-alpes.fr/event/soutenance-de-these-de-moritz-kirchner-irig-ibs/
LOCATION:IBS – Salle des séminaires\, IBS 71 avenue des Martyrs\, Grenoble\, 38042\, France
CATEGORIES:Soutenance,Soutenance de Thèse
ORGANIZER;CN="IBS":MAILTO:ibs.seminaires@ibs
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=Europe/Paris:20260424T110000
DTEND;TZID=Europe/Paris:20260424T120000
DTSTAMP:20260404T162321
CREATED:20260402T150508Z
LAST-MODIFIED:20260402T150513Z
UID:10000116-1777028400-1777032000@sfp-alpes.fr
SUMMARY:Mikhail ELTSOV (Institut de Génétique et de Biologie Moléculaire et Cellulaire\, Illkirch)
DESCRIPTION:Seeing chromatin in situ : advances and challenges of human and machine vision\nRésumé : \nUsing cryo-electron tomography of vitreous sections\, we directly visualized nucleosomes and linker DNA trajectories in situ within flash frozen Drosophila embryos. Measurements of linker length and curvature revealed an irregular zigzag pattern of chromatin folding characterized by relatively limited linker bending. In favorable orientations\, individual nucleosome particles and their structural variants could be identified without the need for structural averaging. Moreover\, we detected particles containing a variable number of DNA gyres\, ranging from fewer than one to up to three\, resembling previously proposed non-octameric nucleosome-like particles. \nTo place these structural observations in the context of functional chromatin organization\, we are developing computational approaches for nucleosome identification in cellular tomograms. We believe that our approach\, Template Learning\, based on training deep-learning networks on synthetic tomographic data\, can provide a general framework for detecting small macromolecular complexes in crowded cellular environments. \n— \nHôte : Irina Gutsche (IBS/MICA)
URL:https://sfp-alpes.fr/event/mikhail-eltsov-institut-de-genetique-et-de-biologie-moleculaire-et-cellulaire-illkirch/
LOCATION:IBS – Salle des séminaires\, IBS 71 avenue des Martyrs\, Grenoble\, 38042\, France
CATEGORIES:Séminaire
ORGANIZER;CN="IBS":MAILTO:ibs.seminaires@ibs
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